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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196934353_196936463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196934353 - 196936463

Intron Length:

2111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

CCCTTTCATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCCCTTTCATC

Flanking Amino Acid:

THHLMVYGNERFIQYLASRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

64.4

41.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.6

0.51

0.8

65.6

35.1

Minor 5ss

31.4

-2.1

38.9

46.2

Minor BPS

56.1

0.17

1.7

67.01

39.4

Associated Gene:

Gene:

PICALM

Ensembl Gene ID:

ENSAPLG00000012265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023036

196902197 - 196964330

62134

ENSAPLT00000022814

196902197 - 196964330

62134

ENSAPLT00000012854

196902197 - 196964330

62134

ENSAPLT00000030578

196901268 - 196964330

63063

ENSAPLT00000025001

196902197 - 196964330

62134