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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197305868_197306284_F

Intron Information:

Intron Rank:

147312

Intron Class:

major

Intron Phase:

Intron Coordinates:

197305868 - 197306284

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TGTTTCTGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.7

83.1

30.9

Major BPS

76.8

0.67

40.9

Major PPT

84.4

0.77

0.8

79.9

32.1

Minor 5ss

29.6

-2.3

2.6

32.5

42.4

Minor BPS

69.1

0.68

1.4

84.5

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029882

197302821 - 197306412

3592