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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197701404_197702531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197701404 - 197702531

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCGTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

GTTTCCGTACTC

Flanking Amino Acid:

GIKADERADYRSMYSVWKSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

51.1

0.03

1.2

39.9

Major PPT

71.3

0.48

0.9

62.9

38.4

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

52.3

0.05

2.3

70.68

41.2

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015495

197636367 - 197767115

130749

ENSAPLT00000046886

197636325 - 197767115

130791