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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197702677_197706177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197702677 - 197706177

Intron Length:

3501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

GTTTCCTGCATT

Flanking Amino Acid:

RCFKEQQLKKYVDQLTRIQA

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

50.1

1.4

43.2

Major PPT

86.1

0.81

0.9

84.6

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

0.43

1.9

81.73

39.8

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015495

197636367 - 197767115

130749

ENSAPLT00000046886

197636325 - 197767115

130791