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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197706312_197706999_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

197706312 - 197706999

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

AAGGCAGTAATC

Flanking Amino Acid:

AVREKADIEAKSKLSLFQSR

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

83.3

29.1

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

63.8

0.47

2.2

75.6

33.8

Minor BPS

42.9

-0.5

2.2

50.75

40.3

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791

ENSAPLT00000015495

197636367 - 197767115

130749