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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197707055_197707488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197707055 - 197707488

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTCATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TACCTTTTAACT

Flanking Amino Acid:

RISLQKASVKLKARRSECNS

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.76

0.6

80.4

25.1

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

69.4

0.69

1.2

77.92

38.5

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791

ENSAPLT00000015495

197636367 - 197767115

130749