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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197729054_197732963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197729054 - 197732963

Intron Length:

3910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TGTAAAATAACC

Flanking Amino Acid:

FQFLLETSSRVVRDYNLQLF

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

61.3

0.28

30.6

Major PPT

81.3

0.7

0.8

73.8

41.4

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

46.8

-0.2

64.01

40.2

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791

ENSAPLT00000015495

197636367 - 197767115

130749