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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197734143_197743129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197734143 - 197743129

Intron Length:

8987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTGGT

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CGTGTCATGACT

Flanking Amino Acid:

VSAMRMTIAESRQLESETGT

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

68.8

42.3

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

-0.4

67.3

43.8

Minor BPS

49.7

0.06

1.8

68.13

42.9

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791