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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197744777_197756738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197744777 - 197756738

Intron Length:

11962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GAGTTCTGATTT

Flanking Amino Acid:

EARESIRKAEIIKLKAEARL

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

88.9

0.88

0.6

88.5

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

48.4

-0

1.7

62.36

41.8

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791

ENSAPLT00000015495

197636367 - 197767115

130749