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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197762983_197763360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197762983 - 197763360

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TGATGCTGATTA

Flanking Amino Acid:

VSGSLNGDSSVCFVKALYDY

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

80.3

32.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

39.8

-1.1

2.9

51.1

Minor BPS

45.7

-0.3

57.93

41.6

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791

ENSAPLT00000015495

197636367 - 197767115

130749