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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197765064_197765227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197765064 - 197765227

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GGTGTGTTGATG

Flanking Amino Acid:

QYFPRSPSTNENSFSSESPG

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

43.4

-0.6

2.1

46.72

40.9

Associated Gene:

Gene:

FCHSD2

Ensembl Gene ID:

ENSAPLG00000014854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046886

197636325 - 197767115

130791

ENSAPLT00000015495

197636367 - 197767115

130749