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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197776905_197777287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197776905 - 197777287

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

CGTTGCTTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAC

U12 Branch Point Sequence:

CAGAGGTTGACT

Flanking Amino Acid:

MAVQISKKRKFVADGIFKAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

75.4

0.57

0.9

69.4

36.8

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

41.9

-0.5

2.4

56.13

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015148

197776875 - 197781022

4148