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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197778830_197779510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197778830 - 197779510

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAAAAT

U12 Branch Point Sequence:

TGACCCAAAATT

Flanking Amino Acid:

YKLLGGLAVRRACYGVLRFI

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.1

Major BPS

48.3

-0.1

1.2

53.2

37.3

Major PPT

84.4

0.77

0.8

81.6

30.5

Minor 5ss

31.1

-2.2

2.6

35.6

40.5

Minor BPS

48.6

-0

1.9

68.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015148

197776875 - 197781022

4148