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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197779699_197780828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197779699 - 197780828

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TCGTGTTGAATG

Flanking Amino Acid:

TAVRHVLLRQGVLGIKVKIM

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

0.55

1.1

63.4

44.3

Major PPT

88.3

0.86

0.7

83.5

24.7

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

47.1

-0.3

1.9

51.18

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015148

197776875 - 197781022

4148