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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197951406_197960998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197951406 - 197960998

Intron Length:

9593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTCTGCTAATC

Flanking Amino Acid:

AIIGHRGAPMLAPENTLMSF

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

0.67

0.8

72.4

37.7

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

47.8

-0.1

2.3

67.95

37.8

Associated Gene:

Gene:

GDPD5

Ensembl Gene ID:

ENSAPLG00000011999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030085

197873401 - 197981134

107734

ENSAPLT00000012531

197873401 - 197981134

107734

ENSAPLT00000048102

197873401 - 197981134

107734