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Intron Name: Anas_platyrhynchos_platyrhynchos_1_197965384_197966799_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
197965384 - 197966799

Intron Length:
1416

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTACT

5'SS Class:
major

3'SS Sequence:
ACTGCCTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGCCAT

U12 Branch Point Sequence:
TTTGCCATAGCC

Flanking Amino Acid:
ILASGIRQQAVMWLPDAERQ

Intron Amino Acid Position:
390

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.5
0.53
1.1
73.9
36.3

Major BPS
62.2
0.3
1.4
72.5
43.5

Major PPT
73.6
0.53
0.9
66.1
35.1

Minor 5ss
35.8
-1.6
2.9
53.8
42.8

Minor BPS
57.5
0.21
2
75.46
40.9

Associated Gene:

Gene:
GDPD5

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

197873401 - 197981134
107734

197873401 - 197981134
107734

197873401 - 197981134
107734