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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198012212_198013665_R

Intron Information:

Intron Rank:

136029

Intron Class:

major

Intron Phase:

Intron Coordinates:

198012212 - 198013665

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TTATTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TGTCCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

85.7

0.8

78.1

36.2

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

62.8

0.48

1.6

78.04

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043921

198011655 - 198015047

3393