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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198083051_198088716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198083051 - 198088716

Intron Length:

5666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

TCCCCCCGACTC

Flanking Amino Acid:

VQWVFSFLGLAQCCVALFIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

82.7

0.74

0.7

80.6

24.6

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

41.7

-0.6

1.9

49.04

41.3

Associated Gene:

Gene:

MOGAT2

Ensembl Gene ID:

ENSAPLG00000011246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011719

198082957 - 198099287

16331