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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198088896_198096038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198088896 - 198096038

Intron Length:

7143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

ATGGCACTAACC

Flanking Amino Acid:

RYMRDYFPVTLVKTAELDPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.1

40.6

Major BPS

64.5

0.36

65.2

28.2

Major PPT

67.7

0.4

40.4

Minor 5ss

39.5

-1.2

3.4

57.8

46.4

Minor BPS

48.4

-0.1

62.82

42.3

Associated Gene:

Gene:

MOGAT2

Ensembl Gene ID:

ENSAPLG00000011246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011719

198082957 - 198099287

16331