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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198097493_198098781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198097493 - 198098781

Intron Length:

1289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

CCTGACCGAATC

Flanking Amino Acid:

MPYRRPIYTVVGKPIPVQKK

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

60.1

0.25

35.6

Major PPT

78.4

0.64

0.8

68.8

37.1

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

41.6

-0.6

1.9

48.48

41.6

Associated Gene:

Gene:

MOGAT2

Ensembl Gene ID:

ENSAPLG00000011246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011719

198082957 - 198099287

16331