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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198196730_198197323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198196730 - 198197323

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGGA

5'SS Class:

major

3'SS Sequence:

CATCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TCTACTGTAACT

Flanking Amino Acid:

VKLPNSEDFQEANPYACLCK

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.3

43.4

Major BPS

66.8

0.42

1.1

37.7

Major PPT

85.4

0.8

80.2

31.4

Minor 5ss

36.2

-1.6

3.4

49.4

46.8

Minor BPS

59.9

0.39

2.1

80.13

42.2

Associated Gene:

Gene:

UVRAG

Ensembl Gene ID:

ENSAPLG00000010570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030304

198170191 - 198242549

72359

ENSAPLT00000011092

198154217 - 198242549

88333