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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198341908_198357630_F

Intron Information:

Intron Rank:

123347

Intron Class:

major

Intron Phase:

Intron Coordinates:

198341908 - 198357630

Intron Length:

15723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGTGCTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

0.47

1.2

61.1

45.5

Major PPT

66.7

0.38

1.1

66.9

38.5

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

49.3

-0.1

1.8

57.62

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033747

198341727 - 198358459

16733