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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198587393_198588228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198587393 - 198588228

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGAA

5'SS Class:

major

3'SS Sequence:

ATTTGATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CTAGCTGTAACA

Flanking Amino Acid:

ASSEKQPASQVQHPIITQGS

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

69.3

37.4

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

81.9

0.72

0.9

78.3

39.6

Minor 5ss

34.1

-1.8

3.6

46.2

49.1

Minor BPS

49.5

-0

2.1

63.27

43.6

Associated Gene:

Gene:

EMSY

Ensembl Gene ID:

ENSAPLG00000010078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042443

198553283 - 198590768

37486

ENSAPLT00000038239

198553283 - 198590768

37486

ENSAPLT00000017648

198553283 - 198590462

37180

ENSAPLT00000010520

198553283 - 198590768

37486

ENSAPLT00000046884

198553283 - 198590462

37180