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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198726502_198731931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198726502 - 198731931

Intron Length:

5430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TTATGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TTGTACAGTATT

Flanking Amino Acid:

PLRIRIGLHTGPCVAGVVGL

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

0.42

1.3

60.1

46.3

Major PPT

84.1

0.77

0.8

81.4

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

43.6

-0.4

2.1

66.81

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010180

198726308 - 198741243

14936