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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198732107_198732227_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

198732107 - 198732227

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CGGTATATGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATG

Flanking Amino Acid:

AVIGNHDVYKVETIGDAYMV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.6

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

55.1

0.12

1.1

47.6

44.6

Minor 5ss

28.5

-2.5

3.1

39.7

45.9

Minor BPS

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010180

198726308 - 198741243

14936