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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198972058_198980614_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

198972058 - 198980614

Intron Length:

8557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTGAACGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CCATGCTGAACG

Flanking Amino Acid:

LASRESLWQKVIPDWKEQEW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

0.42

1.1

57.3

41.7

Major PPT

54.5

0.1

48.4

38.9

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

48.5

-0.2

52.76

47.5

Associated Gene:

Gene:

CAPN5

Ensembl Gene ID:

ENSAPLG00000009147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009554

198960268 - 198990320

30053