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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198980824_198981536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198980824 - 198981536

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

CACCCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

ATTCCTGTCACC

Flanking Amino Acid:

WCALVEKAYAKLSGCYEALD

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

72.7

35.1

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

76.4

0.59

0.8

72.6

31.7

Minor 5ss

37.3

-1.4

46.6

35.6

Minor BPS

47.1

-0.2

2.3

65.76

40.1

Associated Gene:

Gene:

CAPN5

Ensembl Gene ID:

ENSAPLG00000009147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009554

198960268 - 198990320

30053