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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198981730_198982280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198981730 - 198982280

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAT

U12 Branch Point Sequence:

TGAGCGTTGATG

Flanking Amino Acid:

RGGLISCSIKATSAADMEAR

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

75.1

35.1

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

76.3

0.59

0.8

68.1

Minor 5ss

41.4

-1

2.9

52.3

38.8

Minor BPS

45.8

-0.4

2.2

51.47

43.4

Associated Gene:

Gene:

CAPN5

Ensembl Gene ID:

ENSAPLG00000009147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009554

198960268 - 198990320

30053