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Intron Name: Anas_platyrhynchos_platyrhynchos_1_198986055_198986391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198986055 - 198986391

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACACAT

U12 Branch Point Sequence:

TTCTCCCCAACA

Flanking Amino Acid:

RVFTDVPSDCRELTLDEPPH

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

69.9

0.49

75.2

29.8

Major PPT

0.56

0.8

70.3

29.2

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

61.4

0.35

1.9

76.63

40.3

Associated Gene:

Gene:

CAPN5

Ensembl Gene ID:

ENSAPLG00000009147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009554

198960268 - 198990320

30053