Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_199034105_199034891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199034105 - 199034891

Intron Length:

787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGCG

5'SS Class:

major

3'SS Sequence:

CTTGCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TTCACCCCACAC

Flanking Amino Acid:

KATDYNYLAMGNCTTCDGRD

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

0.9

61.3

37.5

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

74.5

0.55

0.8

65.6

36.1

Minor 5ss

25.4

-2.8

3.1

27.6

37.3

Minor BPS

40.9

-0.7

2.1

53.59

43.5

Associated Gene:

Gene:

MYO7A

Ensembl Gene ID:

ENSAPLG00000007675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018705

199020520 - 199062284

41765

ENSAPLT00000008029

199020520 - 199078756

58237