Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_199056909_199057452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199056909 - 199057452

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

ATCTCACCACAT

Flanking Amino Acid:

ELQALQGEGESTHIDGHKKN

Intron Amino Acid Position:

1105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

27.2

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

33.7

-1.9

3.4

48.7

47.5

Minor BPS

38.5

-0.8

2.2

58.16

Associated Gene:

Gene:

MYO7A

Ensembl Gene ID:

ENSAPLG00000007675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008029

199020520 - 199078756

58237