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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199060320_199064215_F


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
199060320 - 199064215

Intron Length:
3896

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATTGT

5'SS Class:
strong_major

3'SS Sequence:
CTGCTGCAAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTAAC

U12 Branch Point Sequence:
GATGGTCTAACA

Flanking Amino Acid:
CFAPSEKFVKYLRNFINGGP

Intron Amino Acid Position:
1220

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87
0.87
0.9
81.2
33.8

Major BPS
66.8
0.42
1.2
69.6
35.5

Major PPT
60.2
0.23
1
54.7
39.4

Minor 5ss
41.3
-1
3
58.7
45.8

Minor BPS
45.5
-0.3
2.1
57.72
41.7

Associated Gene:

Gene:
MYO7A

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

199020520 - 199078756
58237