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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199071108_199072230_F


Intron Information:

Intron Rank:
36

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
199071108 - 199072230

Intron Length:
1123

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CCT|GCATGGCCT

5'SS Class:
weak_major

3'SS Sequence:
TGCCTCCCACCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTGAT

U12 Branch Point Sequence:
TGATCCTTGACT

Flanking Amino Acid:
LGSEELSQEALLKYMGDYPS

Intron Amino Acid Position:
1751

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
53
0.07
1.5
57.2
41.8

Major BPS
67.4
0.43
1.1
57.1
41.8

Major PPT
67.4
0.39
0.9
59.4
36.9

Minor 5ss
32.1
-2
4.3
57.9
46.3

Minor BPS
82.4
1.1
1
89.27
34.8

Associated Gene:

Gene:
MYO7A

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

199020520 - 199078756
58237