Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_199074825_199074911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199074825 - 199074911

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACAGTG

5'SS Class:

major

3'SS Sequence:

CTTCCTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAG

U12 Branch Point Sequence:

TAGCTCTTAGCT

Flanking Amino Acid:

WIKKARPAKDGIVPSLTYQV

Intron Amino Acid Position:

1956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

62.5

42.3

Major BPS

55.1

0.13

1.5

42.7

Major PPT

80.9

0.7

75.7

26.5

Minor 5ss

39.7

-1.2

3.5

52.7

45.5

Minor BPS

60.8

0.42

1.6

74.47

42.1

Associated Gene:

Gene:

MYO7A

Ensembl Gene ID:

ENSAPLG00000007675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008029

199020520 - 199078756

58237