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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199227073_199228739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

199227073 - 199228739

Intron Length:

1667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTGTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTAAA

U12 Branch Point Sequence:

CTGACGTAAACG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.8

Major BPS

53.8

0.1

1.2

55.6

37.8

Major PPT

83.9

0.76

0.9

81.2

36.5

Minor 5ss

45.8

-0.4

2.8

69.7

40.4

Minor BPS

44.2

-0.5

2.4

51.34

48.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006790

199226854 - 199233244

6391