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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199243820_199245245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199243820 - 199245245

Intron Length:

1426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATGGCTTTAAGT

Flanking Amino Acid:

KRRLSTSDSEESYTSKNSED

Intron Amino Acid Position:

1163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

75.1

0.56

0.9

68.7

37.2

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

59.5

0.38

1.8

73.52

43.9

Associated Gene:

Gene:

RSF1

Ensembl Gene ID:

ENSAPLG00000018559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025024

199242539 - 199274021

31483