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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199268309_199270325_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199268309 - 199270325

Intron Length:

2017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTCCTT

5'SS Class:

major

3'SS Sequence:

TTCCGTCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAG

U12 Branch Point Sequence:

TCTTCCGTCATC

Flanking Amino Acid:

QDGSTWKCIVRNRNELAETL

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

67.2

43.7

Major BPS

64.3

0.36

1.6

41.2

Major PPT

70.2

0.45

0.9

62.5

38.9

Minor 5ss

2.8

74.1

42.3

Minor BPS

50.3

-0

2.4

69.44

42.9

Associated Gene:

Gene:

RSF1

Ensembl Gene ID:

ENSAPLG00000018559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025024

199242539 - 199274021

31483