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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199307593_199307794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199307593 - 199307794

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTCCCTATAG

Flanking Amino Acid:

QDPQGTVKVQVLYPDGQAQL

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

86.3

0.82

0.6

81.7

23.4

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

53.7

-0

2.1

69.74

Associated Gene:

Gene:

INTS4

Ensembl Gene ID:

ENSAPLG00000006018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029444

199305558 - 199335983

30426

ENSAPLT00000006284

199305558 - 199336455

30898