Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_199311115_199312072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199311115 - 199312072

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGACG

5'SS Class:

major

3'SS Sequence:

GTCTTCGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTATTCAGAAAT

Flanking Amino Acid:

QLIVTARTARGVEPLFGMCE

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

44.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

78.7

0.65

0.9

38.1

Minor 5ss

32.1

-2

32.9

41.7

Minor BPS

52.4

0.16

1.8

76.25

39.4

Associated Gene:

Gene:

INTS4

Ensembl Gene ID:

ENSAPLG00000006018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029444

199305558 - 199335983

30426

ENSAPLT00000006284

199305558 - 199336455

30898