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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199320772_199321956_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

199320772 - 199321956

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATCTTTT

5'SS Class:

strong_minor

3'SS Sequence:

TCCGTTTCAATAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTTCGTTAACA

Flanking Amino Acid:

TPEPDMDDPAYIAVLVLIFN

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.3

64.8

41.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

69.1

0.43

0.9

65.6

34.9

Minor 5ss

87.3

1.25

1.3

93.7

19.8

Minor BPS

78.2

0.88

91.36

30.2

Associated Gene:

Gene:

INTS4

Ensembl Gene ID:

ENSAPLG00000006018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029444

199305558 - 199335983

30426

ENSAPLT00000006284

199305558 - 199336455

30898