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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199329010_199329546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199329010 - 199329546

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCCTTTTGATA

Flanking Amino Acid:

VVRVQAAKLLGSMQQVSSHF

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

66.6

39.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.7

0.67

0.8

77.9

Minor 5ss

37.2

-1.4

3.3

46.9

Minor BPS

59.8

0.3

1.2

66.4

34.2

Associated Gene:

Gene:

INTS4

Ensembl Gene ID:

ENSAPLG00000006018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029444

199305558 - 199335983

30426

ENSAPLT00000006284

199305558 - 199336455

30898