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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199331122_199332213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199331122 - 199332213

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GAAGTTATAATC

Flanking Amino Acid:

RVRTAAIKAMLQLHERGLKL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

79.5

0.66

0.7

74.3

23.9

Minor 5ss

37.6

-1.4

2.8

48.3

42.5

Minor BPS

45.7

-0.3

1.6

49.37

34.6

Associated Gene:

Gene:

INTS4

Ensembl Gene ID:

ENSAPLG00000006018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006284

199305558 - 199336455

30898

ENSAPLT00000029444

199305558 - 199335983

30426