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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199368785_199369092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199368785 - 199369092

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTGTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAA

U12 Branch Point Sequence:

CAAAACTTGACT

Flanking Amino Acid:

TLICTFISILPSVFCLWFKP

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

0.18

1.3

69.4

37.7

Major PPT

73.4

0.53

0.9

41.2

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

54.5

0.22

1.6

66.89

43.3

Associated Gene:

Gene:

ALG8

Ensembl Gene ID:

ENSAPLG00000005720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005944

199364671 - 199375685

11015