Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_199406129_199406576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199406129 - 199406576

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

GGATTCATGACA

Flanking Amino Acid:

LYEPVLEAIKALPIPNEDRI

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.3

35.6

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

74.4

0.55

74.2

34.3

Minor 5ss

41.4

-1

3.1

56.7

41.9

Minor BPS

52.3

0.07

1.6

61.55

37.7

Associated Gene:

Gene:

USP35

Ensembl Gene ID:

ENSAPLG00000005646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005844

199396177 - 199410938

14762