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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199419248_199420321_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
199419248 - 199420321

Intron Length:
1074

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGGGG

5'SS Class:
major

3'SS Sequence:
TCTCCCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTGAC

U12 Branch Point Sequence:
TGTCTCTCCCCC

Flanking Amino Acid:
QPSSPGPHRKPSTSSVASDE

Intron Amino Acid Position:
597

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67
0.4
1.1
51.7
45.2

Major BPS
57.5
0.19
1.1
48.8
38.1

Major PPT
75.5
0.57
0.7
69.5
24.3

Minor 5ss
27.6
-2.6
3.6
38.4
46.6

Minor BPS
35.1
-1.1
3.5
56.33
42

Associated Gene:

Gene:
GAB2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

199419104 - 199448251
29148