Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_199426859_199429101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199426859 - 199429101

Intron Length:

2243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAG

5'SS Class:

major

3'SS Sequence:

CTTTCCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CTCCCCAAACCT

Flanking Amino Acid:

QCMSRKSENARSASFSQATR

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.5

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

81.1

0.7

73.3

31.6

Minor 5ss

29.1

-2.4

3.4

38.3

46.7

Minor BPS

43.3

-0.4

2.1

61.82

47.7

Associated Gene:

Gene:

GAB2

Ensembl Gene ID:

ENSAPLG00000005487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005672

199419104 - 199448251

29148