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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199538703_199541979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199538703 - 199541979

Intron Length:

3277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTCCC

5'SS Class:

major

3'SS Sequence:

CTGTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

AGCTGGTTAACT

Flanking Amino Acid:

ATAAIHSFFQDHGYVHIHTP

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.2

61.6

41.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

81.6

0.71

0.8

73.1

37.3

Minor 5ss

39.6

-1.2

3.1

43.2

Minor BPS

0.01

2.4

70.74

Associated Gene:

Gene:

NARS2

Ensembl Gene ID:

ENSAPLG00000005256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005471

199501815 - 199546662

44848

ENSAPLT00000036395

199501466 - 199546662

45197

ENSAPLT00000030265

199501730 - 199546662

44933