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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199633331_199639068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199633331 - 199639068

Intron Length:

5738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCGCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AGCTTCCTAATT

Flanking Amino Acid:

QVTVFGRRLRVHNRNLLSLD

Intron Amino Acid Position:

1783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

72.3

39.5

Major BPS

81.9

0.79

0.9

80.1

Major PPT

74.7

0.56

0.8

69.1

31.5

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

57.3

0.31

1.7

71.33

39.9

Associated Gene:

Gene:

TENM4

Ensembl Gene ID:

ENSAPLG00000004223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027228

199616293 - 200105239

488947

ENSAPLT00000048225

199616293 - 199999435

383143

ENSAPLT00000019353

199616293 - 199999435

383143

ENSAPLT00000045238

199616293 - 199999435

383143

ENSAPLT00000004388

199616293 - 200105239

488947

ENSAPLT00000040747

199616293 - 200105239

488947

ENSAPLT00000031543

199616293 - 199834006

217714