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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199643910_199654613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199643910 - 199654613

Intron Length:

10704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TCCTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTCCTTCCATC

Flanking Amino Acid:

SNENGWTTFYEYDSFGRLTN

Intron Amino Acid Position:

1646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.7

0.71

0.7

72.9

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

49.5

-0

1.9

67.75

38.3

Associated Gene:

Gene:

TENM4

Ensembl Gene ID:

ENSAPLG00000004223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031543

199616293 - 199834006

217714

ENSAPLT00000027228

199616293 - 200105239

488947

ENSAPLT00000048225

199616293 - 199999435

383143

ENSAPLT00000019353

199616293 - 199999435

383143

ENSAPLT00000045238

199616293 - 199999435

383143

ENSAPLT00000004388

199616293 - 200105239

488947

ENSAPLT00000040747

199616293 - 200105239

488947