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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199681830_199688239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199681830 - 199688239

Intron Length:

6410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAACC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GCTGATTTAACA

Flanking Amino Acid:

EKGPIVPEIQALQEEINVSG

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

74.3

34.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

80.7

0.69

0.8

75.8

32.8

Minor 5ss

40.8

-1

2.8

43.8

Minor BPS

57.5

0.23

1.6

64.6

Associated Gene:

Gene:

TENM4

Ensembl Gene ID:

ENSAPLG00000004223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027228

199616293 - 200105239

488947

ENSAPLT00000048225

199616293 - 199999435

383143

ENSAPLT00000019353

199616293 - 199999435

383143

ENSAPLT00000045238

199616293 - 199999435

383143

ENSAPLT00000004388

199616293 - 200105239

488947

ENSAPLT00000040747

199616293 - 200105239

488947

ENSAPLT00000031543

199616293 - 199834006

217714